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Computational Systems Biologist
Phone: (540) 231-1799
Email:shoops@vt.edu
Fax: (540) 231-2606
Administrative Specialist: Maureen Lawrence-Kuether
Phone: (540) 231-3669
Email: mlawre04@vbi.vt.edu
Fax:540-231-2606
Personal_Page
| Biochemical Networks Modeling Group | Nutritional Immunology and Molecular Medicine Laboratory
| COPASI | Nutritional Immunology and Molecular Medicine Laboratory Web Portal
Publications:
Liu Z, Pu Y, Li F, et al. Hybrid modeling and simulation of stochastic effects on progression through the eukaryotic cell cycle. The Journal of Chemical Physics. 2012;136:034105–34111. http://dx.doi.org/10.1063%2F1.3677190
Kummer U, Sahle S, Hoops S, Mendes P. Assessing the importance of individual players in biochemical networks in a global way. Febs Journal. 2010;277:17–18.
Hucka M, Hoops S, Keating SM, Le Nov. Systems Biology Markup Language (SBML) Level 2: Structures and Facilities for Model Definitions. Nature Precedings. 2008.
Hoops S, de la Fuente A, Mendes P. Partial Estimation of the Jacobian from Time Course Data. Heidelberg, Germany; 2003:93–98. 3rd Workshop on Computation of Biochemical Pathways and Genetic Networks.
Hoops S, Eckart JD, Sobral BWS. Integration and Interoperation in Life Sciences: Examples and Challenges. New Generation Computing. 2003;22.
Li XJ, Brazhnik O, Kamal A, et al. Databases and Visualization for Metabolomics. In: Harrigan G, Goodacre R, eds. Metabolite Profiling: Its Role in Biomarker Discovery and Gene Function Analysis. Dordrecht: Kluwer Academic Publishers; 2003:293–309.
Hoops S, Chen D, Mendes P. High Performance Computing for Biochemical Network Simulations, in High Performance Computing. San Diego, CA; 2002:16–20. The Society for Modeling and Simulation International.
Benguria R, Hoops S, Siedentop H. Bounds on the Excess Charge and the Ionization Energy of the Hellman-Weizs. Annales de l. 1992;45:47–65.
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