© 2000 - 2012 Virginia Bioinformatics Institute
Wednesday, 16 May 2012
VBI PROGRAMS AND CORES

  • NDSSL

    Leader: Christopher Barrett

    MembersTitle
    Abhijin AdigaApplied Computer Scientist
    Achla MaratheLead Economist, Network Dynamics and Simulation Science Laboratory
    Anil VullikantiAssociate Professor, Network Dynamics and Simulation Science Laboratory
    Ann PaulGraduate Research Assistant, NDSSL
    Annette FengSr Simulation Science System Software Developer
    Anthony PeconeUndergraduate Research Assistant
    Anurodh JoshiGraduate Research Assistant, NDSSL
    Ashwin AjiGraduate Research Assistant, NDSSL
    Bryan LewisPublic Health Policy Analyst
    Caitlin RiversGraduate Research Assistant, NDSSL
    Christopher KuhlmanGraduate Research Assistant, NDSSL
    Dawen XieSoftware Engineer
    Elaine NsoesieGraduate Research Assistant, NDSSL
    Gaurav TuliGraduate Research Assistant, NDSSL
    Gizem KorkmazResearch Associate
    Guanhong PeiGraduate Research Assistant , NDSSL
    Hemanth MakkapatiGraduate Research Assistant, NDSSL
    Henning MortveitAssociate Professor, Network Dynamics and Simulation Science Laboratory
    Huadong XiaGraduate Research Assistant, NDSSL
    Jae-seung YeomGraduate Research Assistant, NDSSL
    Jiangzhuo ChenApplied Computational Simulation Scientist
    Jody WilliamsSpecial Assistant to the NCR Director
    Jonathan LeidigGraduate Research Assistant, NDSSL
    Jose JimenezGraduate Research Assistant, NDSSL
    Junwhan KimGraduate Research Assistant, NDSSL
    Kalyani NagarajGraduate Research Assistant, NDSSL
    Keith BissetSimulation and Systems Software Development Scientist
    Kevin HallSoftware Engineer
    Madhav MaratheDeputy Director, Network Dynamics and Simulation Science Laboratory
    Md Maksudul AlamGraduate Research Assistant, NDSSL
    Md-Abdul KhanComputational Scientist
    Nidhi ParikhGraduate Research Assistant, NDSSL
    Paula StretzSenior Simulation Science Software System Developer
    Pete JobstVisiting Collaborator, Bassaganya-Riera Group
    Rajesh SubbiahGraduate Research Assistant, NDSSL
    S M ArifuzzamanGraduate Research Assistant, NDSSL
    Samarth SwarupApplied Computer Scientist
    Sara ShashaaniGraduate Research Assistant, NDSSL
    Shaojuan LiaoGraduate Research Assistant, NDSSL
    Shridhar ChandanGraduate Research Assistant
    Siddharth KrishnanGraduate Research Assistant, NDSSL
    Spencer LeeGraduate Research Assistant
    Stephen EubankProfessor, Virginia Bioinformatics Institute
    Sudip SahaGraduate Research Assistant, NDSSL
    Suruchi DeodharGraduate Research Assistant, NDSSL
    Sushrut ShiroleGraduate Research Assistant
    Tariq KamalGraduate Research Assistant, NDSSL
    Thierry PlatiniPostdoctoral Associate
    William MarmagasSenior Systems Engineer
    Yifei MaGraduate Research Assistant, NDSSL
    Young Yun Chung BaekStatistician
    Zalia ShamsGraduate Research Assistant, NDSSL
  • NIMML Research Group

    Leader: Josep Bassaganya-Riera

    MembersTitle
    Adria Carbo BarriosGraduate Research Assistant, NIMML
    Barbara Kronsteiner-DobramyslPostdoctoral Associate, NIMML
    Cassandra WashingtonPhD Student, GBCB, NIMML
    James WalkeProject Manager
    Monica Viladomiu PujolGraduate Research Assistant, NIMML
    Nikki LewisGraduate Research Assistant, NIMML
    Patrick HeizerUG Laboratory Assistant, NIMML
    Pinyi LuGraduate Research Assistant, NIMML
    Raquel Hontecillas-MagarzoAssistant Professor, Virginia Bioinformatics Institute
    Stefan HoopsComputational Systems Biologist
    Xia WangLaboratory Manager, Immunologist, NIMML
    Xiaoying ZhangImmunologist, NIMML
    Yongguo MeiResearch Software Engineer
  • Social and Decision Informatics Laboratory

    MembersTitle

  • Biochemical Networks Modeling Group

    Leader: Pedro Pedrosa Mendes

    MembersTitle
    Stefan HoopsComputational Systems Biologist
  • Dickerman Research Group

    Leader: Allan Dickerman

    MembersTitle
  • Hoeschela Research Group

    Leader: Ina Hoeschele

    MembersTitle
    Hui YiGraduate Research Assistant, Hoeschele
  • Kale Research Group

    Leader: Shiv Kale

    MembersTitle
    Gloria TrivittUSP Student
    Helen ClarkUSP Student
  • Applied Discrete Mathematics

    Leader: Reinhard Laubenbacher

    MembersTitle
    Andrew ReaganVisiting Student, Laubenbacher Group
    Ariane HofmannVisiting Student, Laubenbacher Group
    Claus-Thomas KadelkaVisiting Student, Laubenbacher Group
    David Murrugarra TomairoGraduate Research Assistant, Laubenbacher Group
    Jason BrunsonGraduate Research Assistant, Laubenbacher Group
    Julia ChifmanVisiting Scholar, Reinhard Laubenbacher
    Katarzyna SwirydowiczGraduate Research Assistant, Laubenbacher Group
    Kathryn BrewerUndergraduate Scholars Program - Laubenbacher Group
    Madison BrandonVisiting Student, Laubenbacher Group
    Matthew OremlandVisiting Student, Laubenbacher Group
    Raphael IsokpehiVisiting Scholar, Laubenbacher Group
    Seda AratGraduate Research Assistant, Laubenbacher Group
    Shernita LeeVisiting Student, Laubenbacher Group
  • Lawrence Research Group

    Leader: Christopher Lawrence

    MembersTitle
    Amanda RumoreGraduate Research Assistant, Lawrence
    Bradley HowardGraduate Research Assistant, Lawrence
    Ha DangGraduate Research Assistant, Lawrence
    Mihaela BabiceanuGraduate Research Assistant
    Prathyusha KolcondaGraduate Research Assistant, Lawrence
    Saleena KhannaUndergraduate Lab Assistant
    Sang-Wook ParkFungal Biotechnology Specialist
    Tristan HayesVisiting Student, Lawrence Lab
  • Microbial Diversity Group

    Leader: Biswarup Mukhopadhyay

    MembersTitle
    Anna PerevalovaFulbright Scholar from Russian Academy of Sciences
    Dwi SusantiGraduate Research Assistant, Mukhopadhyay
    James ByunUndergraduate Research Student, Mukhopadhay group
    Jason RodriguezGraduate Assistant, Mukhopadhyay
    Jayasimha RaoVisiting Scholar, Mukhophadyay Lab
    Karla PiedlUndergraduate Research Student, Mukhopadhyay Group
    Usha LoganathanLaboratory Technician Trainee
  • Pereira Research Group

    Leader: Andy Pereira

    MembersTitle
    Akshay KakumanuGraduate Research Assistant, Pereira
    Dragana AvirovikLaboratory Technician
    Subodh SrivastavaBioinformatician
    Vinaya VijayanGraduate Research Assistant, NDSSL
  • Our group's primary focus is the development of computational methods for problems in molecular biology. Most of our work is in genomics, with emphasis on bacterial genomes.

    Leader: Joao Setubal

    MembersTitle
    Kuan YangGraduate Research Assistant, Setubal
  • Synthetic Science Research Group

    Leader: Jean Peccoud

    MembersTitle
    Amanda WilsonLead Software Developer
    David BallCell Life Imaging Specialist
    Laura AdamGBCB Graduate Research Assistant
    Matthew LuxGBCB Graduate Research Assistant
    Neil AdamesYeast Systems Biologist
    Samantha TaylorGene Synthesis Specialist
  • Tyler Research Group

    Leader: Brett Tyler

    MembersTitle
    Brendan MannUndergraduate Laboratory Assistant
    Regina HanlonGenomics Technician
    Tian ZhouUndergraduate Laboratory Assistant

  • CBB Research Group description

    Leader: Bruno Sobral

    MembersTitle
    Alice WattamSenior Computational Biologist
    Andrew WarrenSoftware Engineer, CID Group
    Chengdong ZhangSenior Software Engineer
    Chunhong MaoSenior Project Associate
    Daniel SullivanSenior Database Architect
    Dustin MachiSenior Research Associate
    Eric NordbergSenior Software Engineer
    Hyun Seung YooSoftware Engineer
    Jongsoon ParkGraduate Research Assistant, CIG
    Joseph GabbardResearch Assistant Professor
    Joseph GillespieSenior Computational Biologist
    Julie SchulmanTraining and Curriculum Developer and Project Coordinator
    Maulik ShuklaSenior Computer Scientist
    Oral DalaySoftware Engineer
    Rebecca WillCyberinfrastructure Division Co-Director, Software Development
    Roger GoughData and Database Administrator
    Stephen CammerSenior Bioinformatics Scientist
    Timothy DriscollSoftware Engineer, CID Group
    Yan ZhangSenior Software Engineer

  • Garner Research Group

    Leader: Harold Garner

    MembersTitle
    Ashwin Acharya PuthigeGraduate Research Assistant
    Caroline OsborneVisiting Student, Garner Lab
    Christopher FranckResearch Assistant Professor, Statistics
    Enusha KarunasenaResearch Scientist
    Hadas FletcherVisiting Student, Garner Lab
    Heather LewenczukLab Technician, Garner Lab
    Hongseok TaeMedical Informatician
    Iccha SethiGraduate Research Assistant, Garner Lab
    Jasminkumar BavarvaGeneticist
    Jonathan FreezerVisiting Student, Garner Lab
    Jonathan MayoUSP Student
    Katarzyna MichalakMolecular Biologist and Laboratory Manager
    Krzysztof KepaMedical Informatician
    Lauren McIverSoftware Developer
    Lee BakerScientific Programmer
    Natalie FonvillePostdoctoral Associate: Geneticist
    Nitu LaharUndergraduate Scholars Program Student, MIS
    Rebecca KirschnerVisiting Student, Garner Lab
  • Genetics and Genomic Medicine Lab

    Leader: David Mittelman

    MembersTitle
    Calvin StephensUSP Student, Mittelman Lab
    Desmond GabanScientific Programmer, Mittelman Lab
    Gareth HighmanGraduate Research Assistant, Mittleman
    Ian LeUndergraduate Scholars Program Student, MIS
    Robert WardComputational Geneticist
    Robin VargheseGraduate Research Assistant, Mittelman Lab
    Zachary PavloskyResearch Technician, Mittelman Lab
  • Michalak Research Group

    Leader: Pawel Michalak

    MembersTitle
    Graciela SantopietroHost Fungal Interactions Specialist & Lab Manager
    Young KimPostdoctoral Associate - Bioinformatics Programmer, Michalak Lab
    Zalman VaksmanGraduate Research Assistant, MIS

  • CCF group

    Leader: Kevin Shinpaugh

    MembersTitle
    Anthony RobinsonAdministrative Services Coordinator
    Brian McelraftComputer Support Specialist Lead
    Dan LiuSoftware Development Specialist
    David BynumComputer Support Specialist Lead
    Dominik BorkowskiSystems Architect
    Douglas McMasterSystems Administrator
    Ivan MorozovWeb Administrator
    James StollIT Development Lead
    Jason DeckerVideo Conferencing Support Technician
    Jeremy JohnsonSystems Administrator Lead
    Jian LuDatabase Engineer & Administrator
    Jonathan DixonSoftware Development Specialist
    Jonathan LightInformation Technology Specialist
    Michael SnowSystems Administrator
    Vedavyas DuggiralaGraduate Research Assistant
    William GentrySystems Administrator
  • Data Analysis Core (DAC)

    Leader: Robert Settlage

    MembersTitle
    Hongseok TaeMedical Informatician
    Jasminkumar BavarvaGeneticist
    Kevin McMahonResearch Assocate: Medical Informatician
  • Environmental Core

    MembersTitle
    Carmine GranielloLaboratory Operations Specialist
  • CLF

    Leader: Robert Settlage

    MembersTitle
    Donald ShawGel Electrophoresis Lab Technician
    Jennifer JenretteNext Generation Genomics Specialist
    Julie MarchandMolecular Biologist
    Kristin LeeImage Analysis Specialist
    Megan FrairSequencing Specialist